PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_000800-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 256aa    MW: 28315.9 Da    PI: 8.2928
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_000800-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.14.3e-053986253
                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
            HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                   +  + erE++ Rd++N+ f+eL   l +a     + + Ka+iL   ++ +++
  NNU_000800-RA 39 KIHKAEREKQKRDHLNELFHELGISLEPA----RQNNGKASILGDSTRLLRD 86
                   567889*****************999998....5667777788777766665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000837.59E-43592No hitNo description
Gene3DG3DSA:4.10.280.102.2E-837104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.54E-1037102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.8683787IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MVSEAPASTA KAKEVSQVSE KPACSSLPNK RNHGKIPKKI HKAEREKQKR DHLNELFHEL  60
GISLEPARQN NGKASILGDS TRLLRDLLAQ VESLKREHAA LLSESHYVTI EKNELKEENS  120
VLEAEIEKLQ TELQERVQCK PTWDAATAQM QHKNSGSHLP EDHLRLPVVD AKLQSAPVGS  180
VFVIPFHHEL KAYPEPMSTH APSNPPSQVS RPHARYPTPS DSWPAQLLSD QLNTTKDILS  240
KNTTGISRGG QVAGSV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010257065.10.0PREDICTED: transcription factor bHLH47-like
RefseqXP_010257057.10.0PREDICTED: transcription factor bHLH47-like
RefseqXP_010257049.10.0PREDICTED: transcription factor bHLH47-like
TrEMBLD7SX962e-77D7SX96_VITVI; Putative uncharacterized protein
STRINGVIT_14s0108g00480.t015e-77(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.36e-47bHLH family protein